50 Recent Changes in EBioScience Web
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2013-05-17 - 13:46
Vacancies in the e BioScience Group See overview About the group The e Bioscience group is part of the laboratory of the AMC, which is headed by Prof. Dr. Antoine ...
2013-05-17 - 12:54
Statistics for nop EBioScience Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic ...
2013-05-16 - 09:49
Application server Quick test of webapp lib jars If a deployed webapp file depends on some jar which, another version of that jar can be tested without redeploying ...
2013-05-06 - 13:28
e BioinfraGateway The e Bioinfra Gateway (e Bioinfra Gateway) is a web application that provides facilitated access to the Grid infrastructure for researchers that ...
2013-04-29 - 11:55
WS PGrade Documentation for Workflow Developers General Information Go to the gateway Request an account by sending an email to support at ebioscience .amc .nl ...
2013-04-08 - 08:01
Freesurfer on the e BioinfraGateway Go back to e BioinfraGateway user documentation Video Supported Data Format (Freesurfer) The input data can be in either dicom ...
2013-03-22 - 09:45
Getting Started on the e BioInfra NOTE: we recommend to follow the complete guide from one single computer using the default configurations. This will make prevent ...
2013-03-14 - 14:29
See http://git.or.cz/course/svn.html for a crash course in git svn MostaphaAlMourabit 2013 03 14
2013-03-01 - 00:06
AMC e BioInfra Gateway (SCI BUS) The AMC e BioInfra Gateway is a web portal based on technology under development by the project funded by FP7 INFRASTRUCTURES 2011 ...
2013-02-21 - 11:18
e BioInfrastructure (e BioInfra) The e BioScience Infrastructure (e BioInfra) was initially developed for medical image analysis applications as part of the Medical ...
2013-02-20 - 16:17
Documentation This is an unsorted list of handy links and documentation (under construction). Please give us feedback or contribute by editing these pages directly ...
2013-02-19 - 21:27
e BioScience News Jan 2013 Silvia Olabarriaga interviewed by Talk for a briefing in and Knowledge Transfer 2012 November 7 Mahdi Jaghoori (NMC, ebiogrid) presented ...
2013-01-02 - 12:27
e BioScience Projects The activities of the e bioscience group are currently carried out through participation in various projects, which intersect and overlap at ...
2013-01-02 - 12:15
e BioScience Web Menu About http://www.bioinformaticslaboratory.nl/twiki/bin/view/EBioScience/PeopleEBioScience People http://www ...
2012-12-05 - 15:29
Jobs or Workflow Components in R There is an isntallation of R available on the Grid but this does not include many packages. To be able to use R, you first to need ...
2012-11-29 - 13:39
Creating graphics with R on the grid R is a language and environment for statistical computing and graphics. However, if you want to create graphics with R on the ...
2012-11-27 - 14:48
Jobs or Workflow Components in matlab TODO: update mcr version number, 64 bits and make doc consistent in the documentation It is possible to run matlab programs ...
2012-11-27 - 14:45
e BioInfra Advanced Page Here you find more detailed information about the e BioInfra software and services (see fig). Grid and Middleware Services Starting from ...
2012-11-24 - 10:12
Tools Services Getting Started Documentation Services Gateway, e BioInfraGate Documentation SCI BUS AMC Gateway, SCI BUS AMC Gateway Documentation ...
2012-11-16 - 18:46
Silvia's Visit to UFRGS in November 2012 On 12 23 November 2012, Silvia Olabarriaga has visited the Institute of the University of Rio Grande do Sul in Porto Alegre ...
2012-10-22 - 10:51
Logistic Regression Double Cross Validation on the e BioinfraGateway Go back to e BioinfraGateway user documentation Description This application is an implementation ...
2012-10-11 - 15:08
Data Management on the Grid Grid jobs need to access files located remotely. These files can be sent from the workstation to the job and back every time using a mechanism ...
2012-10-09 - 18:05
e bioinfra Gateway: MOTEUR Workflow Developers The e bioinfra gateway pages for MOTEUR workflow developers provide acess to the e bioinfra platform services at the ...
2012-08-21 - 12:19
Contact Us! If you wish more information about the research activities of the e bioscience group or to get access to the e BioInfra, please contact us: Bioinformatics ...
2012-07-17 - 13:32
FreeSurfer Steps Visualization This "dot" file translate this table: http://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable into a more comprehensible diagram. ...
2012-07-11 - 11:56
People e BioScience The core of the e bioscience team is composed of: Prof. Dr. Antoine van Kampen SilviaOlabarriaga (group leader) Mark Santcroos ...
2012-07-10 - 07:12
BLAST on the e BioinfraGateway Go back to e BioinfraGateway user documentation Instructions Upload one or more nucleotide sequence files and one or more text files ...
2012-06-13 - 10:24
Getting Started with Workflow Dashboard Liferay Portlet This wiki page introduces the first time user to the new workflow/provenance dashboard LR portlet.LR stand ...
2012-06-13 - 06:16
conference, Amsterdam 2012
2012-06-07 - 14:15
Creating Gwendia workflows This page is a collection of common practice (tips and tricks) to creat workflows that run on the EBioInfra. Useful hints The word ...
2012-05-16 - 11:38
VBrowser The Virtual Resource Browser (VBrowser) was designed and developed at the Informatics Institute of the University of Amsterdam by Piter de Boer in the VL ...
2012-05-16 - 11:02
MOTEUR What is MOTEUR MOTEUR is a workflow management system developed by the Team, in particular Glatard and Montagnat. For more information check: How to get ...
2012-05-13 - 21:41
Workflow Repository Best Practices Overview Please follow the instructions on this page to compose and store your workflows in a more structured way, so other ...
2012-04-23 - 14:04
DTI Preprocessing on the e BioinfraGateway Go back to e BioinfraGateway user documentation Introduction This application preprocesses the MRI scans and prepare them ...
2012-04-06 - 10:44
DTI Atlas on the e BioinfraGateway Go back to e BioinfraGateway user documentation Video Data Preparation You need to inspect the output data of the DTI Preprocessing ...
2012-04-06 - 10:40
MatthanCaan 2012 04 06 DTI BedpostX processing for probabilistic tractography Go back to e BioinfraGateway user documentation Introduction BedpostX is part of the ...
2012-03-20 - 13:45
MOTEUR: Advanced Page This page is intended for advanced users and developers of the e BioInfra. Please read the MOTEUR page first. Details of workflow execution ...
2012-03-20 - 13:45
sagasw Overview sagasw (Stand Alone Generic Application Service Wrapper) is a utility that wraps any (non interactive) command line program into a grid job so that ...
2012-03-16 - 09:52
MatthanCaan 2012 02 23 DTI Population Registration To do DARTELRegDTI S0 run this matlab binary multi threaded? How many? Should application control no. ...
2012-03-09 - 15:12
DTI workflows on EBioScience Documentation on processing of DTI data can be found on leBIC wiki (AMC only, outside AMC). Meeting 09 03 2012 (Paul, Shayan, Matthan ...
2012-02-02 - 14:37
Visit Dario Bijker 2 Februari 2012 Beroepsorientatiedag VWO @ AMC Mensen: Antoine van Kampen Evert Mouw Paul Groot Andrel Linnenbank 11:45 ...
2011-12-27 - 09:06
Genome Compare on the e BioinfraGateway Go back to e BioinfraGateway user documentation Introduction This application counts and clusters homologous genes to find ...
2011-12-19 - 16:24
Workflow Tutorial Step by step introduction to create workflows, and execute these workflows from the Vbrowser GUI with the MOTEUR plugin. Grid certificate Request ...
2011-12-16 - 14:53
Data from the 1000 genomes project Source data set Experiment data http://www.1000genomes.org/ Data set NA06984 (selected a random individual) Direct link ...
2011-08-19 - 11:52
Loading... e bioinfragateway e bioinfragateway user documentation
2011-07-26 - 14:32
Parallel MMBE Goals In CT angiography (CTA) scans, the arteries are often obscured by bone. MMBE is a medical imaging algorithm and software for bone removal from ...
2011-07-07 - 10:57
eBioCrawler Introduction: The eBioCrawler is composed of a java based agent that screens the logs files, classifies and links the data, and stores it into the data ...
2011-07-07 - 10:12
Classification for Omics Data Application R 2.13.0 libraries for windows All libraries in file : R 2.13.0 library CL Desktop.zip should be extracted in the directory ...
2011-06-22 - 22:33
2011-06-21 - 10:33
Previous members of the e BioScience Team Angela Luyf Daniel Weterbeek Yassene Mohammed Carsten Byrman Martin Stam Paul van Hooft ...
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